CCT4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCT4 mutation is significantly associated with the total protein of many other genes, with 25 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCT4-associated genes across cancer lineages are eEF2, ERK2, and FoxM1. Each is linked with CCT4 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCT4-to-partner and partner-to-CCT4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eEF2 grouped by CCT4-low versus CCT4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCT4→partner) and Y-score (partner→CCT4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeEF2 →+0.453+3.169.008.01831
UCECERK2 →+0.267+2.459.004.02031
UCECFoxM1 →+0.278+2.459.026.02031
UCECJNK2 →+0.350+3.026<.001.01831
UCECKu80 →+0.317+2.472.005.01131
UCECMEK1_p_S217_S221 →-0.393-3.321.002.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

eEF2 by CCT4 expression — UCEC

Box plot of eEF2 in CCT4-low vs CCT4-high samples in UCEC.

Explore this box plot interactively →

Exploration