CCSAP

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCSAP mutation is significantly associated with the RNA expression of many other genes, with 1 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CCSAP-associated genes across cancer lineages are C1QL2. Each is linked with CCSAP in more than 1 cancer types. Because this analysis shows association rather than direction, both CCSAP-to-partner and partner-to-CCSAP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C1QL2 grouped by CCSAP-low versus CCSAP-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCSAP→partner) and Y-score (partner→CCSAP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEC1QL2 →+0.006+4.684.004.00231
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

C1QL2 by CCSAP expression — LARGE_INTESTINE

Box plot of C1QL2 in CCSAP-low vs CCSAP-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration