CCR6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCR6 mutation is significantly associated with the RNA expression of many other genes, with 1,799 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCR6-associated genes across cancer lineages are UQCRH, ZNF530, and KLHL25. Each is linked with CCR6 in more than 2 cancer types. Because this analysis shows association rather than direction, both CCR6-to-partner and partner-to-CCR6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, UQCRH grouped by CCR6-low versus CCR6-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCR6→partner) and Y-score (partner→CCR6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECUQCRH →+0.803+3.839.003<.00133
UCECZNF530 →+0.417+2.753<.001.00232
UCECKLHL25 →+0.466+2.136.002.00932
UCECPNMA3 →-1.062-3.542.003.00232
UCECUQCR10 →+0.415+3.711<.001<.00132
UCECNDUFA6 →+0.631+2.403<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,799 associations by consensus.

UQCRH by CCR6 expression — UCEC

Box plot of UQCRH in CCR6-low vs CCR6-high samples in UCEC.

Explore this box plot interactively →

Exploration