CCNT2

Across TCGA cell cohorts, CCNT2 mutation is significantly associated with the RNA expression of many other genes, with 14 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible CCNT2-associated genes across cancer lineages are R3HDML, BANF2, and CST9. Each is linked with CCNT2 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCNT2-to-partner and partner-to-CCNT2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, R3HDML grouped by CCNT2-low versus CCNT2-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCNT2→partner) and Y-score (partner→CCNT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLOOD_Lymphoma	R3HDML →	+0.006	+5.209	<.001	.005	3	1
BLOOD_Lymphoma	BANF2 →	+0.047	+5.643	<.001	.002	3	1
BLOOD_Lymphoma	CST9 →	+0.060	+5.209	<.001	.005	3	1
BLOOD_Lymphoma	CYLC1 →	+0.029	+4.867	<.001	.009	3	1
BLOOD_Lymphoma	C18orf63 →	+0.012	+4.867	<.001	.009	3	1
LUNG_NSCLC_LUAD	TMEM244 →	+0.079	+4.189	<.001	.002	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 14 associations by consensus.

R3HDML by CCNT2 expression — BLOOD_Lymphoma

Explore this box plot interactively →