CCNI

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CCNI RNA differs between tumor and matched normal tissue in 7 of 18 cancer types tested, making tumor–normal expression one of CCNI’s most consistent transcriptional readouts.

The strongest signal is observed in bladder urothelial carcinoma (BLCA), where CCNI RNA is repressed in tumor relative to normal tissue. In most cancer types CCNI is over-expressed in tumor, although a few such as BLCA and UCEC show the opposite, repressed pattern.

BLCA, UCEC, and CHOL are the cancer types where CCNI tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CCNI RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
BLCAMaleAll−0.690.0038view →
UCECAllAll−0.979<.0016view →
CHOLAllAll+1.443<.0013view →
THCAAllAll−0.387<.0013view →
LUSCAllIII,IV−0.631.0201view →
KIRPMaleAll−0.381.0361view →
KIRCAllAll+0.182.0121view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 7 lineages.

CCNI–BLCA

Tumor-vs-normal expression box plot for CCNI RNA in BLCA.

Open the BLCA breakdown →

Exploration