CCN4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCN4 protein abundance is significantly associated with the RNA expression of many other genes, with 13,605 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible CCN4-associated genes across cancer lineages are MXRA5, TNFAIP6, and POSTN. Each is linked with CCN4 in more than 2 cancer types. Because this analysis shows association rather than direction, both CCN4-to-partner and partner-to-CCN4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCN4 versus MXRA5 in LUAD, with a Pearson correlation of 0.57.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCN4→partner) and Y-score (partner→CCN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADMXRA5 →+1.844+0.565<.001<.00133
LUADTNFAIP6 →+1.374+0.637<.001<.00133
GBMPOSTN →+4.998+0.936<.001<.00133
BRCASFRP2 →+2.276+0.686<.001<.00133
GBMCOL5A2 →+2.131+0.966<.001<.00133
GBMCOL15A1 →+1.978+1.127.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,605 associations by consensus.

CCN4 vs MXRA5 — LUAD

Per-sample scatter of CCN4 vs MXRA5 in LUAD (Pearson r = 0.57).

Explore this scatter interactively →

Exploration