CCDC97

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCDC97 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,796 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CCDC97-associated GO terms across cancer lineages are Negative regulation of DNA-templated transcription, elongation, Negative regulation of calcium ion export across plasma membrane, and Positive regulation of T-helper 17 cell lineage commitment. Each is linked with CCDC97 in more than 16 cancer types. Because this analysis shows association rather than direction, both CCDC97-to-partner and partner-to-CCDC97 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of DNA-templated transcription, elongation grouped by CCDC97-low versus CCDC97-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC97→partner) and Y-score (partner→CCDC97) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHNegative regulation of DNA-templated transcription, elongation →+0.098+0.808.005.004317
UPPER_AERODIGESTIVE_TRACTNegative regulation of calcium ion export across plasma membrane →+0.061+0.566<.001<.001316
STOMACHPositive regulation of T-helper 17 cell lineage commitment →+0.253+1.180.002.001316
STOMACHPositive regulation of gene expression, epigenetic →+0.087+1.111.001<.001316
BONEmRNA alternative polyadenylation →+0.077+0.591<.001.002315
BONEEpigenetic regulation of gene expression →+0.094+0.626<.001.005315
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,796 associations by consensus.

Negative regulation of DNA-templated transcription, elongation by CCDC97 expression — STOMACH

Box plot of Negative regulation of DNA-templated transcription, elongation in CCDC97-low vs CCDC97-high samples in STOMACH.

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