CCDC90B

Across TCGA patient cohorts, CCDC90B RNA expression is significantly associated with the protein abundance of many other proteins, with 9,798 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible CCDC90B-associated proteins across cancer lineages are PPME1, RNF214, and RSF1. Each is linked with CCDC90B in more than 3 cancer types. Because this analysis shows association rather than direction, both CCDC90B-to-partner and partner-to-CCDC90B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC90B versus PPME1 in HNSC, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC90B→partner) and Y-score (partner→CCDC90B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	PPME1 →	+0.270	+0.585	<.001	<.001	3	4
PDAC	RNF214 →	+0.212	+0.351	<.001	<.001	3	4
GBM	RSF1 →	+0.303	+0.323	.001	.001	3	4
PDAC	MTMR2 →	+0.326	+0.323	<.001	.001	3	3
LSCC	ZPR1 →	+0.191	+0.403	.003	<.001	3	3
PDAC	SPAST_S268 →	+0.999	+0.317	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,798 associations by consensus.

CCDC90B vs PPME1 — HNSC

Explore this scatter interactively →