CCDC90B

Across TCGA patient cohorts, CCDC90B protein abundance is significantly associated with the RNA expression of many other genes, with 10,341 significant associations in total. COAD shows the largest number of these associations.

The most reproducible CCDC90B-associated genes across cancer lineages are PPP2R5E, PCLAF, and H2AC20. Each is linked with CCDC90B in more than 2 cancer types. Because this analysis shows association rather than direction, both CCDC90B-to-partner and partner-to-CCDC90B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC90B versus PPP2R5E in BRCA, with a Pearson correlation of -0.24.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC90B→partner) and Y-score (partner→CCDC90B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	PPP2R5E →	-0.333	-0.207	<.001	.003	3	3
COAD	PCLAF →	-0.721	-0.387	<.001	<.001	3	3
COAD	H2AC20 →	-0.725	-0.292	.001	.001	3	3
COAD	FANCM →	-0.583	-0.363	<.001	.002	3	3
UCEC	NAP1L1 →	-0.355	-0.267	.004	<.001	3	3
UCEC	SAMD4A →	-0.906	-0.344	<.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,341 associations by consensus.

CCDC90B vs PPP2R5E — BRCA

Explore this scatter interactively →