CCDC9

Across TCGA cell cohorts, CCDC9 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,750 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible CCDC9-associated GO terms across cancer lineages are Cytosolic transport, Protein localization to vacuole, and Negative regulation of calcium ion export across plasma membrane. Each is linked with CCDC9 in more than 12 cancer types. Because this analysis shows association rather than direction, both CCDC9-to-partner and partner-to-CCDC9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cytosolic transport grouped by CCDC9-low versus CCDC9-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC9→partner) and Y-score (partner→CCDC9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKIN	Cytosolic transport →	+0.092	+0.975	<.001	<.001	3	13
BONE	Protein localization to vacuole →	+0.092	+0.815	.001	.004	3	13
BONE	Negative regulation of calcium ion export across plasma membrane →	+0.117	+1.019	<.001	<.001	3	12
BONE	Regulation of pattern recognition receptor signaling pathway →	+0.052	+0.665	.007	.003	2	13
BLOOD_Lymphoma	Endosomal transport →	+0.052	+1.134	<.001	<.001	3	12
BREAST	Regulation of miRNA transcription →	+0.065	+0.787	.005	.003	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,750 associations by consensus.

Cytosolic transport by CCDC9 expression — SKIN

Explore this box plot interactively →