CCDC66

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC66 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,313 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CCDC66-associated proteins across cancer lineages are QRICH1, RBM15B, and TASOR. Each is linked with CCDC66 in more than 6 cancer types. Because this analysis shows association rather than direction, both CCDC66-to-partner and partner-to-CCDC66 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC66 versus QRICH1 in LSCC, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC66→partner) and Y-score (partner→CCDC66) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCQRICH1 →+0.201+0.393.001.00137
OVRBM15B →+0.326+0.351<.001.00236
GBMTASOR →+0.233+0.432<.001<.00136
LUADRRBP1_T275 →-0.709-0.284<.001.00135
GBMHCFC1 →+0.294+0.488<.001<.00135
GBMKIAA1143 →+0.283+0.379<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,313 associations by consensus.

CCDC66 vs QRICH1 — LSCC

Per-sample scatter of CCDC66 vs QRICH1 in LSCC (Pearson r = 0.41).

Explore this scatter interactively →

Exploration