CCDC65

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC65 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,522 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CCDC65-associated proteins across cancer lineages are IFT140, IFT74, and LZTFL1. Each is linked with CCDC65 in more than 4 cancer types. Because this analysis shows association rather than direction, both CCDC65-to-partner and partner-to-CCDC65 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC65 versus IFT140 in UCEC, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC65→partner) and Y-score (partner→CCDC65) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECIFT140 →+0.421+0.912<.001<.00135
GBMIFT74 →+0.498+0.770<.001<.00135
UCECLZTFL1 →+0.492+1.118<.001<.00135
UCECRPGR_S961 →+0.747+1.013<.001<.00134
BRCABBS2 →+0.442+0.395<.001<.00134
BRCACLUAP1 →+0.404+0.618<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,522 associations by consensus.

CCDC65 vs IFT140 — UCEC

Per-sample scatter of CCDC65 vs IFT140 in UCEC (Pearson r = 0.42).

Explore this scatter interactively →

Exploration