CCDC65

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCDC65 mutation is significantly associated with the RNA expression of many other genes, with 103 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CCDC65-associated genes across cancer lineages are OR8B12, OR51J1, and OR2F1. Each is linked with CCDC65 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC65-to-partner and partner-to-CCDC65 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR8B12 grouped by CCDC65-low versus CCDC65-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC65→partner) and Y-score (partner→CCDC65) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSOR8B12 →+0.061+4.392<.001.00331
OESOPHAGUSOR51J1 →+0.132+4.017<.001.00731
OESOPHAGUSOR2F1 →+0.016+4.392<.001.00331
OESOPHAGUSOR8B3 →+0.032+4.392<.001.00331
LARGE_INTESTINETTLL1 →+0.731+3.169<.001.00931
LARGE_INTESTINERAB5IF →-0.678-3.416.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 103 associations by consensus.

OR8B12 by CCDC65 expression — OESOPHAGUS

Box plot of OR8B12 in CCDC65-low vs CCDC65-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration