CCDC59

Across TCGA cell cohorts, CCDC59 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,408 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible CCDC59-associated GO terms across cancer lineages are snRNA metabolic process, U1 snRNA 3'-end processing, and U5 snRNA 3'-end processing. Each is linked with CCDC59 in more than 11 cancer types. Because this analysis shows association rather than direction, both CCDC59-to-partner and partner-to-CCDC59 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, snRNA metabolic process grouped by CCDC59-low versus CCDC59-high in BREAST.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC59→partner) and Y-score (partner→CCDC59) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BREAST	snRNA metabolic process →	+0.054	+0.630	<.001	<.001	3	12
OVARY	U1 snRNA 3'-end processing →	+0.117	+0.577	<.001	.002	3	12
OVARY	U5 snRNA 3'-end processing →	+0.117	+0.577	<.001	.002	3	12
LIVER	Maturation of SSU-rRNA →	+0.129	+0.853	.006	.001	3	11
LIVER	rRNA processing →	+0.078	+0.503	.003	.003	3	11
BONE	RNA modification →	+0.059	+0.606	<.001	.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,408 associations by consensus.

snRNA metabolic process by CCDC59 expression — BREAST

Explore this box plot interactively →