CCDC57

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC57 protein abundance is significantly associated with the RNA expression of many other genes, with 1,830 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible CCDC57-associated genes across cancer lineages are UBXN10, ZNF474, and ERICH3. Each is linked with CCDC57 in more than 2 cancer types. Because this analysis shows association rather than direction, both CCDC57-to-partner and partner-to-CCDC57 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC57 versus UBXN10 in UCEC, with a Pearson correlation of 0.47.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC57→partner) and Y-score (partner→CCDC57) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECUBXN10 →+1.668+0.716<.001<.00133
UCECZNF474 →+1.329+0.463<.001.00833
UCECERICH3 →+1.982+0.631.001<.00133
LSCCKRT23 →+1.282+0.279.001.00632
UCECDNAH7 →+1.815+0.855<.001<.00132
LUADCCDC170 →+0.982+0.371<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,830 associations by consensus.

CCDC57 vs UBXN10 — UCEC

Per-sample scatter of CCDC57 vs UBXN10 in UCEC (Pearson r = 0.47).

Explore this scatter interactively →

Exploration