CCDC34

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC34 mutation is significantly associated with the total protein of many other genes, with 22 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCDC34-associated genes across cancer lineages are EGFR_pY1068, A-Raf_pS299, and INPP4B. Each is linked with CCDC34 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC34-to-partner and partner-to-CCDC34 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by CCDC34-low versus CCDC34-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC34→partner) and Y-score (partner→CCDC34) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR_pY1068 →-0.225-2.906.034.00131
UCECA-Raf_pS299 →-0.140-2.459.005.01931
UCECINPP4B →-0.346-3.584.011.00231
UCECJNK_pT183_Y185 →-0.206-2.209.003.01131
UCECKu80 →+0.348+3.469<.001.00231
UCECMEK1 →+0.423+2.700.006.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 22 associations by consensus.

EGFR_pY1068 by CCDC34 expression — UCEC

Box plot of EGFR_pY1068 in CCDC34-low vs CCDC34-high samples in UCEC.

Explore this box plot interactively →

Exploration