CCDC28A

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, CCDC28A mass-spec protein is linked to patient survival in 7 of 34 cancer types, making it a survival-associated CCDC28A data layer compared with 26 for mass-spec protein and 5 for mutation status.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where higher CCDC28A mass-spec protein is associated with better overall survival. In most high-consensus cancer types, elevated CCDC28A expression acts as an unfavorable survival marker, although some lineages such as CCRCC and PDAC show a favorable association.

CCRCC, LUAD, and PDAC are the cancer types where CCDC28A mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
CCRCCOSMedianIV1.0000.451.01617view →
LUADDFSQuartileIII,IV0.4630.995.00615view →
PDACOSMedianII,III,IV0.9680.697.01210view →
UCECDFSMedianAll0.9460.866.0412view →
HNSCOSQuartileAll0.6410.841.0331view →
GBMOSQuartileAll0.6950.860.0411view →
LSCCDFSMedianIII,IV0.4710.837.0291view →
Pink = unfavorable, green = favorable. Showing the 7 strongest of 7 lineages.

CCDC28A–CCRCC (OS)

Kaplan–Meier survival curve for CCDC28A mass-spec protein-high vs -low samples in CCRCC.

Open the CCRCC breakdown →

Exploration