CCDC28A

Across TCGA patient cohorts, CCDC28A RNA expression is significantly associated with the protein abundance of many other proteins, with 11,549 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible CCDC28A-associated proteins across cancer lineages are VTA1, ECHDC1, and YARS1. Each is linked with CCDC28A in more than 5 cancer types. Because this analysis shows association rather than direction, both CCDC28A-to-partner and partner-to-CCDC28A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC28A versus VTA1 in OV, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC28A→partner) and Y-score (partner→CCDC28A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	VTA1 →	+0.391	+0.639	<.001	<.001	3	6
BRCA	ECHDC1 →	+0.397	+0.388	.008	.004	3	5
BRCA	YARS1 →	-0.304	-0.551	.001	<.001	3	4
LSCC	ARID1B →	+0.206	+0.437	<.001	<.001	3	4
BRCA	PTPN12_S435 →	-0.447	-0.483	<.001	<.001	3	4
BRCA	CCDC28A_S239 →	+1.061	+0.900	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,549 associations by consensus.

CCDC28A vs VTA1 — OV

Explore this scatter interactively →