CCDC28A

Across TCGA patient cohorts, CCDC28A protein abundance is significantly associated with the RNA expression of many other genes, with 13,762 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CCDC28A-associated genes across cancer lineages are NCAPH, ESPL1, and SAMD1. Each is linked with CCDC28A in more than 5 cancer types. Because this analysis shows association rather than direction, both CCDC28A-to-partner and partner-to-CCDC28A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC28A versus NCAPH in UCEC, with a Pearson correlation of -0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC28A→partner) and Y-score (partner→CCDC28A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	NCAPH →	-1.019	-0.312	<.001	<.001	3	6
UCEC	ESPL1 →	-1.083	-0.251	<.001	<.001	3	6
BRCA	SAMD1 →	-0.610	-0.289	<.001	<.001	3	6
BRCA	PLK1 →	-0.703	-0.295	.009	.001	3	6
UCEC	CDKN3 →	-1.011	-0.236	<.001	.007	3	5
UCEC	CENPI →	-1.000	-0.314	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,762 associations by consensus.

CCDC28A vs NCAPH — UCEC

Explore this scatter interactively →