CCDC25

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC25 protein abundance is significantly associated with the RNA expression of many other genes, with 5,646 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible CCDC25-associated genes across cancer lineages are INTS10, MCPH1, and INTS9. Each is linked with CCDC25 in more than 8 cancer types. Because this analysis shows association rather than direction, both CCDC25-to-partner and partner-to-CCDC25 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC25 versus INTS10 in UCEC, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC25→partner) and Y-score (partner→CCDC25) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECINTS10 →+0.589+0.291.002.00139
OVMCPH1 →+0.667+0.402<.001.00139
OVINTS9 →+0.856+0.447<.001<.00138
UCECR3HCC1 →+0.765+0.249.005.00238
BRCASARAF →+0.670+0.266<.001<.00138
UCECELP3 →+1.111+0.312.001.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,646 associations by consensus.

CCDC25 vs INTS10 — UCEC

Per-sample scatter of CCDC25 vs INTS10 in UCEC (Pearson r = 0.39).

Explore this scatter interactively →

Exploration