CCDC196

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCDC196 RNA expression is significantly associated with the go_rna of many other GO terms, with 902 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CCDC196-associated GO terms across cancer lineages are Regulation of centriole-centriole cohesion, Positive regulation of translational initiation in response to stress, and Positive regulation of RNA polymerase II transcription preinitiation complex assembly. Each is linked with CCDC196 in more than 3 cancer types. Because this analysis shows association rather than direction, both CCDC196-to-partner and partner-to-CCDC196 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC196→partner) and Y-score (partner→CCDC196) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONERegulation of centriole-centriole cohesion →+0.134+0.019.003.00534
BONEPositive regulation of translational initiation in response to stress →-0.157-0.019.004.00534
BONEPositive regulation of RNA polymerase II transcription preinitiation complex assembly →+0.188+0.019<.001.00533
OVARYCentrosome cycle →+0.049+0.024.002.00933
OVARYPurine ribonucleotide biosynthetic process →+0.049+0.018.005.00833
OVARYRibonucleoside triphosphate biosynthetic process →+0.056+0.024.002.00633
Each partner links to its Q-omics profile. Showing the 6 strongest of 902 associations by consensus.

Exploration