CCDC18

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC18 protein abundance is significantly associated with the RNA expression of many other genes, with 5,395 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CCDC18-associated genes across cancer lineages are ADGRG3, TJP3, and CORO2A. Each is linked with CCDC18 in more than 2 cancer types. Because this analysis shows association rather than direction, both CCDC18-to-partner and partner-to-CCDC18 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC18 versus ADGRG3 in LSCC, with a Pearson correlation of 0.53.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC18→partner) and Y-score (partner→CCDC18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCADGRG3 →+1.132+1.045<.001<.00133
LSCCTJP3 →+1.457+0.827.002.00432
GBMCORO2A →+1.055+1.146.002<.00132
BRCARASSF8 →-1.052-0.975.002.00632
LSCCSLPI →+1.680+0.938<.001<.00132
UCECCDHR3 →+1.303+0.692.005<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,395 associations by consensus.

CCDC18 vs ADGRG3 — LSCC

Per-sample scatter of CCDC18 vs ADGRG3 in LSCC (Pearson r = 0.53).

Explore this scatter interactively →

Exploration