CCDC18

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC18 mutation is significantly associated with the total protein of many other genes, with 31 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCDC18-associated genes across cancer lineages are EGFR_pY1068, ATM, and Cyclin-E2. Each is linked with CCDC18 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC18-to-partner and partner-to-CCDC18 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by CCDC18-low versus CCDC18-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC18→partner) and Y-score (partner→CCDC18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR_pY1068 →-0.173-1.643.026.00332
UCECATM →-0.477-1.893<.001<.00132
UCECCyclin-E2 →+0.138+1.290.008.03432
UCEC14-3-3_beta →-0.074-2.295.017.00531
UCECERK2 →+0.151+2.222.011.00931
UCECJNK_pT183_Y185 →-0.181-2.459<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

EGFR_pY1068 by CCDC18 expression — UCEC

Box plot of EGFR_pY1068 in CCDC18-low vs CCDC18-high samples in UCEC.

Explore this box plot interactively →

Exploration