CCDC174

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCDC174 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CCDC174-associated genes across cancer lineages are PNMA3 and CFHR2. Each is linked with CCDC174 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC174-to-partner and partner-to-CCDC174 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PNMA3 grouped by CCDC174-low versus CCDC174-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC174→partner) and Y-score (partner→CCDC174) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEPNMA3 →+0.143+3.781.002.00331
LARGE_INTESTINECFHR2 →+0.032+3.700<.001.00931
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

PNMA3 by CCDC174 expression — LARGE_INTESTINE

Box plot of PNMA3 in CCDC174-low vs CCDC174-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration