CCDC172

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC172 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,000 significant associations in total. STAD shows the largest number of these associations.

The most reproducible CCDC172-associated GO terms across cancer lineages are Alcohol biosynthetic process, Cellular response to steroid hormone stimulus, and Protein-containing complex disassembly. Each is linked with CCDC172 in more than 8 cancer types. Because this analysis shows association rather than direction, both CCDC172-to-partner and partner-to-CCDC172 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Alcohol biosynthetic process grouped by CCDC172-low versus CCDC172-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC172→partner) and Y-score (partner→CCDC172) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADAlcohol biosynthetic process →+0.059+0.089<.001<.00139
STADCellular response to steroid hormone stimulus →+0.070+0.040<.001<.00139
STADProtein-containing complex disassembly →+0.070+0.041<.001<.00139
STADProtein folding →+0.082+0.040<.001<.00139
STADEndosome organization →+0.085+0.043<.001<.00139
STADNucleoside triphosphate metabolic process →+0.087+0.044<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,000 associations by consensus.

Alcohol biosynthetic process by CCDC172 expression — STAD

Box plot of Alcohol biosynthetic process in CCDC172-low vs CCDC172-high samples in STAD.

Explore this box plot interactively →

Exploration