CCDC17

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC17 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,110 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible CCDC17-associated proteins across cancer lineages are FNDC3B_S393, GFPT2_T227, and CEP135. Each is linked with CCDC17 in more than 3 cancer types. Because this analysis shows association rather than direction, both CCDC17-to-partner and partner-to-CCDC17 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC17 versus FNDC3B_S393 in LUAD, with a Pearson correlation of -0.52.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC17→partner) and Y-score (partner→CCDC17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADFNDC3B_S393 →-0.896-1.467<.001.00134
CCRCCGFPT2_T227 →-1.524-0.557.006.00334
UCECCEP135 →+0.352+1.029<.001<.00134
UCECCROCC →+0.409+1.301<.001<.00134
GBMPLOD3 →-0.544-0.410.001<.00134
CCRCCVPS13D_S2671 →-0.748-0.429<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,110 associations by consensus.

CCDC17 vs FNDC3B_S393 — LUAD

Per-sample scatter of CCDC17 vs FNDC3B_S393 in LUAD (Pearson r = -0.52).

Explore this scatter interactively →

Exploration