CCDC169

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC169 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,869 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CCDC169-associated proteins across cancer lineages are SPART, NOL9, and NUP155. Each is linked with CCDC169 in more than 5 cancer types. Because this analysis shows association rather than direction, both CCDC169-to-partner and partner-to-CCDC169 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC169 versus SPART in UCEC, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC169→partner) and Y-score (partner→CCDC169) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSPART →+0.492+0.867<.001<.00126
LSCCNOL9 →+0.269+0.345<.001<.00134
LSCCNUP155 →+0.214+0.502<.001<.00134
LSCCPAIP1 →+0.411+0.528<.001<.00134
HNSCPAXBP1 →+0.197+0.579<.001.00834
LSCCXPO1 →+0.275+0.431<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,869 associations by consensus.

CCDC169 vs SPART — UCEC

Per-sample scatter of CCDC169 vs SPART in UCEC (Pearson r = 0.31).

Explore this scatter interactively →

Exploration