CCDC148

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC148 mutation is significantly associated with the total protein of many other genes, with 24 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCDC148-associated genes across cancer lineages are VHL, 4E-BP1, and eIF4G. Each is linked with CCDC148 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC148-to-partner and partner-to-CCDC148 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VHL grouped by CCDC148-low versus CCDC148-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC148→partner) and Y-score (partner→CCDC148) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECVHL →-0.745-1.906.003.01532
UCEC4E-BP1 →+0.277+2.145.006.00932
UCECeIF4G →+0.263+2.999.024.03531
UCECAcetyl-a-Tubulin-Lys40 →+0.449+1.710.018.02531
UCECJNK2 →+0.205+2.196.006.03231
UCECKu80 →+0.205+1.778.020.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 24 associations by consensus.

VHL by CCDC148 expression — UCEC

Box plot of VHL in CCDC148-low vs CCDC148-high samples in UCEC.

Explore this box plot interactively →

Exploration