CCDC144CP

Across TCGA patient cohorts, CCDC144CP mutation is significantly associated with the RNA expression of many other genes, with 3,358 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCDC144CP-associated genes across cancer lineages are RNU4ATAC11P, RNU1-1, and LINC01072. Each is linked with CCDC144CP in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC144CP-to-partner and partner-to-CCDC144CP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU4ATAC11P grouped by CCDC144CP-low versus CCDC144CP-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC144CP→partner) and Y-score (partner→CCDC144CP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUSC	RNU4ATAC11P →	+0.553	+4.105	<.001	.005	3	2
CESC	RNU1-1 →	+0.283	+4.409	<.001	.006	3	2
UCEC	LINC01072 →	+0.134	+2.389	<.001	.001	3	2
UCEC	RNU7-29P →	+0.160	+3.059	<.001	.005	3	2
UCEC	MIR4445 →	+0.146	+4.156	<.001	.004	3	2
COAD	RNU6-269P →	+0.333	+7.741	<.001	.009	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,358 associations by consensus.

RNU4ATAC11P by CCDC144CP expression — LUSC

Explore this box plot interactively →