CCDC144A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCDC144A mutation is significantly associated with the RNA expression of many other genes, with 15 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible CCDC144A-associated genes across cancer lineages are ACOD1, CABP5, and DEFB129. Each is linked with CCDC144A in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC144A-to-partner and partner-to-CCDC144A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ACOD1 grouped by CCDC144A-low versus CCDC144A-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC144A→partner) and Y-score (partner→CCDC144A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaACOD1 →+0.005+4.452<.001.00131
BLOOD_LymphomaCABP5 →+0.009+4.452<.001.00131
BLOOD_LymphomaDEFB129 →+0.026+4.662<.001.00331
BLOOD_LymphomaLYVE1 →+0.033+3.843<.001.00731
BLOOD_LymphomaFCN2 →+0.044+3.714<.001.00631
BLOOD_LymphomaOTOP1 →+0.005+4.169<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

ACOD1 by CCDC144A expression — BLOOD_Lymphoma

Box plot of ACOD1 in CCDC144A-low vs CCDC144A-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration