CCDC142

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC142 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,927 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CCDC142-associated proteins across cancer lineages are ZFR, RBM12, and SUPT6H. Each is linked with CCDC142 in more than 5 cancer types. Because this analysis shows association rather than direction, both CCDC142-to-partner and partner-to-CCDC142 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC142 versus ZFR in LSCC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC142→partner) and Y-score (partner→CCDC142) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCZFR →+0.308+0.559<.001<.00136
GBMRBM12 →+0.313+0.466<.001<.00136
GBMSUPT6H →+0.218+0.288<.001.00236
HNSCHNRNPLL →+0.225+0.453<.001.00236
GBMILF2 →+0.310+0.413<.001<.00136
GBMCPSF3 →+0.203+0.235<.001.00236
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,927 associations by consensus.

CCDC142 vs ZFR — LSCC

Per-sample scatter of CCDC142 vs ZFR in LSCC (Pearson r = 0.43).

Explore this scatter interactively →

Exploration