CCDC130

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CCDC130 RNA differs between tumor and matched normal tissue in 14 of 18 cancer types tested, making tumor–normal expression one of CCDC130’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where CCDC130 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types CCDC130 is over-expressed in tumor, although a few such as KICH and THCA show the opposite, repressed pattern.

KIRC, COAD, and HNSC are the cancer types where CCDC130 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CCDC130 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCMaleIV+0.595<.00111view →
COADAllIV+0.958<.00110view →
HNSCMaleIV+0.800<.00110view →
LIHCFemaleII,III,IV+1.386<.0019view →
CHOLAllAll+2.038<.0015view →
READAllAll+0.811<.0015view →
KICHFemaleAll−0.729<.0015view →
ESCAAllAll+0.696<.0015view →
STADAllII,III,IV+0.560.0035view →
THCAMaleII,III,IV−0.404.0134view →
BLCAAllAll+0.450.0143view →
KIRPAllIV+0.865.0162view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 14 lineages.

CCDC130–KIRC

Tumor-vs-normal expression box plot for CCDC130 RNA in KIRC.

Open the KIRC breakdown →

Exploration