CCDC13

Across TCGA patient cohorts, CCDC13 mutation is significantly associated with the RNA expression of many other genes, with 4,225 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCDC13-associated genes across cancer lineages are RN7SL339P, GLRX5, and EIF4A3. Each is linked with CCDC13 in more than 2 cancer types. Because this analysis shows association rather than direction, both CCDC13-to-partner and partner-to-CCDC13 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL339P grouped by CCDC13-low versus CCDC13-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC13→partner) and Y-score (partner→CCDC13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUSC	RN7SL339P →	+0.190	+3.785	<.001	.004	3	3
UCEC	GLRX5 →	+0.353	+2.032	.004	.005	3	3
SKCM	EIF4A3 →	+0.532	+2.826	.001	.001	3	3
LIHC	OOEPP1 →	+0.089	+3.413	<.001	.007	3	2
LIHC	MIR6796 →	+0.354	+3.853	<.001	.003	3	2
READ	IGHD5-12 →	+1.742	+5.421	<.001	.005	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,225 associations by consensus.

RN7SL339P by CCDC13 expression — LUSC

Explore this box plot interactively →