CCDC105

RNA expression — cross-omics
Cross-omicsRNA → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCDC105 RNA expression is significantly associated with the mutation status of many other genes, with 79 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible CCDC105-associated genes across cancer lineages are TNS1, SIN3B, and SYT14. Each is linked with CCDC105 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC105-to-partner and partner-to-CCDC105 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TNS1 grouped by CCDC105-low versus CCDC105-high in PANCREAS.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC105→partner) and Y-score (partner→CCDC105) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASTNS1 →+4.029+0.008.007<.00132
PANCREASSIN3B →+4.614+0.010.004<.00131
PANCREASSYT14 →+4.614+0.010.004<.00131
PANCREASRBM47 →+5.614+0.013.002<.00131
PANCREASGLDC →+5.614+0.013.002<.00131
PANCREASNPIPB5 →+4.029+0.008.007<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 79 associations by consensus.

TNS1 by CCDC105 expression — PANCREAS

Box plot of TNS1 in CCDC105-low vs CCDC105-high samples in PANCREAS.

Explore this box plot interactively →

Exploration