CCBE1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCBE1 protein abundance is significantly associated with the RNA expression of many other genes, with 4,629 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CCBE1-associated genes across cancer lineages are MFNG, SAMHD1, and RS1. Each is linked with CCBE1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCBE1-to-partner and partner-to-CCBE1 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCBE1→partner) and Y-score (partner→CCBE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCMFNG →+0.776+0.941<.001<.00132
LSCCSAMHD1 →+0.462+0.682.003.00232
LSCCRS1 →+0.142+0.745.004<.00132
LUADRGCC →+0.495+0.593<.001<.00132
LSCCLILRB5 →+0.702+1.022<.001<.00132
LSCCCAV1 →+1.024+0.885<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,629 associations by consensus.

Exploration