CBR4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CBR4 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,558 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CBR4-associated proteins across cancer lineages are ARFIP1, HPF1, and SCOC. Each is linked with CBR4 in more than 5 cancer types. Because this analysis shows association rather than direction, both CBR4-to-partner and partner-to-CBR4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CBR4 versus ARFIP1 in BRCA, with a Pearson correlation of 0.55.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CBR4→partner) and Y-score (partner→CBR4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAARFIP1 →+0.297+0.630<.001<.00136
GBMHPF1 →+0.389+0.478<.001.00136
PDACSCOC →+0.270+0.278.002.00135
COADTTC19 →+0.372+0.440<.001<.00135
GBMDOK3 →-0.457-0.372.001.00335
OVCEP44 →+0.569+0.846<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,558 associations by consensus.

CBR4 vs ARFIP1 — BRCA

Per-sample scatter of CBR4 vs ARFIP1 in BRCA (Pearson r = 0.55).

Explore this scatter interactively →

Exploration