CAVIN4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CAVIN4 RNA expression is significantly associated with the protein abundance of many other proteins, with 23,203 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CAVIN4-associated proteins across cancer lineages are CEP170, CLINT1, and CCDC80. Each is linked with CAVIN4 in more than 7 cancer types. Because this analysis shows association rather than direction, both CAVIN4-to-partner and partner-to-CAVIN4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CAVIN4 versus CEP170 in OV, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CAVIN4→partner) and Y-score (partner→CAVIN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCEP170 →+0.319+0.676<.001<.00138
BRCACLINT1 →-0.212-0.425<.001.00137
PDACCCDC80 →+0.897+0.625<.001<.00136
LSCCCLASP1 →+0.241+0.572<.001<.00136
OVDENND2D →-0.643-1.025<.001<.00136
COADFN1 →+0.872+0.265<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 23,203 associations by consensus.

CAVIN4 vs CEP170 — OV

Per-sample scatter of CAVIN4 vs CEP170 in OV (Pearson r = 0.37).

Explore this scatter interactively →

Exploration