CATSPERE

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CATSPERE mutation is significantly associated with the RNA expression of many other genes, with 2,455 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CATSPERE-associated genes across cancer lineages are TRABD, POLG, and SNHG21. Each is linked with CATSPERE in more than 2 cancer types. Because this analysis shows association rather than direction, both CATSPERE-to-partner and partner-to-CATSPERE results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TRABD grouped by CATSPERE-low versus CATSPERE-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CATSPERE→partner) and Y-score (partner→CATSPERE) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTRABD →+0.421+3.032<.001<.00133
UCECPOLG →+0.521+2.364<.001<.00133
UCECSNHG21 →+0.450+1.740<.001.00233
UCECRNA5SP413 →+0.762+1.561<.001.00233
UCECRPS10-NUDT3 →+0.150+1.802.007<.00132
UCECDCP1A →+0.353+1.432.008.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,455 associations by consensus.

TRABD by CATSPERE expression — UCEC

Box plot of TRABD in CATSPERE-low vs CATSPERE-high samples in UCEC.

Explore this box plot interactively →

Exploration