CATSPER1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CATSPER1 mutation is significantly associated with the RNA expression of many other genes, with 31 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CATSPER1-associated genes across cancer lineages are IQCF5, OR11H12, and SULT6B1. Each is linked with CATSPER1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CATSPER1-to-partner and partner-to-CATSPER1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IQCF5 grouped by CATSPER1-low versus CATSPER1-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CATSPER1→partner) and Y-score (partner→CATSPER1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaIQCF5 →+0.119+5.786<.001<.00132
STOMACHOR11H12 →+0.047+4.280<.001.00131
LUNG_NSCLC_LUADSULT6B1 →+1.213+4.662<.001.00531
LUNG_NSCLC_LUADOR6V1 →+0.018+5.189<.001<.00131
LARGE_INTESTINEETNPPL →+0.187+4.021.005.00131
LARGE_INTESTINEUTF1 →+0.015+3.217<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

IQCF5 by CATSPER1 expression — BLOOD_Leukemia

Box plot of IQCF5 in CATSPER1-low vs CATSPER1-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration