CAT

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CAT RNA expression is significantly associated with the go_rna of many other GO terms, with 3,501 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CAT-associated GO terms across cancer lineages are Response to vitamin E, Response to L-ascorbic acid, and Detoxification of hydrogen peroxide. Each is linked with CAT in more than 17 cancer types. Because this analysis shows association rather than direction, both CAT-to-partner and partner-to-CAT results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Response to vitamin E grouped by CAT-low versus CAT-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CAT→partner) and Y-score (partner→CAT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEResponse to vitamin E →+0.168+0.971<.001<.001318
LUNG_SCLCResponse to L-ascorbic acid →+0.283+1.412<.001<.001317
BLOOD_LeukemiaDetoxification of hydrogen peroxide →+0.178+1.944<.001<.001315
BONEUV protection →+0.161+1.432<.001<.001313
LUNG_SCLCResponse to phenylpropanoid →+1.347+1.360<.001<.001313
BLOOD_LeukemiaResponse to light intensity →+0.247+1.932<.001<.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,501 associations by consensus.

Response to vitamin E by CAT expression — BONE

Box plot of Response to vitamin E in CAT-low vs CAT-high samples in BONE.

Explore this box plot interactively →

Exploration