CASTOR2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CASTOR2 protein abundance is significantly associated with the RNA expression of many other genes, with 9,300 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CASTOR2-associated genes across cancer lineages are CASTOR3, CNTN4, and STAG3. Each is linked with CASTOR2 in more than 5 cancer types. Because this analysis shows association rather than direction, both CASTOR2-to-partner and partner-to-CASTOR2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CASTOR2 versus CASTOR3 in BRCA, with a Pearson correlation of 0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CASTOR2→partner) and Y-score (partner→CASTOR2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACASTOR3 →+0.746+0.522<.001<.00136
BRCACNTN4 →+0.798+0.285<.001.00735
LSCCSTAG3 →+0.784+0.379<.001<.00135
BRCAGTF2IP4 →+0.732+0.556<.001<.00135
LSCCPVRIG →+0.471+0.343<.001<.00134
BRCASRRM3 →+0.802+0.312<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,300 associations by consensus.

CASTOR2 vs CASTOR3 — BRCA

Per-sample scatter of CASTOR2 vs CASTOR3 in BRCA (Pearson r = 0.46).

Explore this scatter interactively →

Exploration