CASP9

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CASP9 mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CASP9-associated genes across cancer lineages are LYZL4, OR4K2, and BPIFB6. Each is linked with CASP9 in more than 1 cancer types. Because this analysis shows association rather than direction, both CASP9-to-partner and partner-to-CASP9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LYZL4 grouped by CASP9-low versus CASP9-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CASP9→partner) and Y-score (partner→CASP9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaLYZL4 →+0.049+4.152.005.00931
BLOOD_LeukemiaOR4K2 →+0.031+4.969<.001.00331
BLOOD_LeukemiaBPIFB6 →+0.047+4.969<.001.00331
BLOOD_LeukemiaS100A7A →+0.042+4.152<.001.00931
BLOOD_LeukemiaBPIFB3 →+0.161+4.874<.001.00231
OVARYASB17 →+0.023+5.807<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

LYZL4 by CASP9 expression — BLOOD_Leukemia

Box plot of LYZL4 in CASP9-low vs CASP9-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration