CASP6

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CASP6 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,344 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CASP6-associated proteins across cancer lineages are SEC24B, MEF2C_S396, and GSTCD. Each is linked with CASP6 in more than 4 cancer types. Because this analysis shows association rather than direction, both CASP6-to-partner and partner-to-CASP6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CASP6 versus SEC24B in OV, with a Pearson correlation of 0.53.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CASP6→partner) and Y-score (partner→CASP6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVSEC24B →+0.204+0.620<.001<.00135
LSCCMEF2C_S396 →-0.400-0.312<.001.00134
BRCAGSTCD →+0.309+0.497<.001<.00134
BRCAARFIP1 →+0.331+0.424<.001.00325
BRCARABL6 →+0.329+0.525<.001<.00133
BRCAINPP4B →+0.976+0.502<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,344 associations by consensus.

CASP6 vs SEC24B — OV

Per-sample scatter of CASP6 vs SEC24B in OV (Pearson r = 0.53).

Explore this scatter interactively →

Exploration