CASP4LP

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CASP4LP mutation is significantly associated with the total protein of many other genes, with 4 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CASP4LP-associated genes across cancer lineages are Bcl-2, Caspase-8, and 4E-BP1. Each is linked with CASP4LP in more than 1 cancer types. Because this analysis shows association rather than direction, both CASP4LP-to-partner and partner-to-CASP4LP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Bcl-2 grouped by CASP4LP-low versus CASP4LP-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CASP4LP→partner) and Y-score (partner→CASP4LP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECBcl-2 →+0.514+2.196.004.03431
UCECCaspase-8 →-0.290-2.973.027.03531
UCEC4E-BP1 →+0.377+3.029.007.01831
UCECMEK1 →+0.429+3.321.025.01021
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

Bcl-2 by CASP4LP expression — UCEC

Box plot of Bcl-2 in CASP4LP-low vs CASP4LP-high samples in UCEC.

Explore this box plot interactively →

Exploration