CASP10

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CASP10 mutation is significantly associated with the RNA expression of many other genes, with 2,668 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CASP10-associated genes across cancer lineages are MYO19, CYCSP17, and PDF. Each is linked with CASP10 in more than 1 cancer types. Because this analysis shows association rather than direction, both CASP10-to-partner and partner-to-CASP10 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MYO19 grouped by CASP10-low versus CASP10-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CASP10→partner) and Y-score (partner→CASP10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMYO19 →+0.487+3.024<.001<.00132
HNSCCYCSP17 →+0.100+4.736<.001.00732
SKCMPDF →+0.496+2.926<.001<.00132
SKCMPITPNB →+0.435+2.713.005.00332
UCECGINS3 →+0.459+1.684.001.00732
SKCMSETD3 →+0.461+3.932<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,668 associations by consensus.

MYO19 by CASP10 expression — UCEC

Box plot of MYO19 in CASP10-low vs CASP10-high samples in UCEC.

Explore this box plot interactively →

Exploration