CASKIN2

Across TCGA cell cohorts, CASKIN2 RNA expression is significantly associated with the RNA expression of many other genes, with 11,537 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CASKIN2-associated genes across cancer lineages are TSEN54, RPTOR, and HELZ. Each is linked with CASKIN2 in more than 16 cancer types. Because this analysis shows association rather than direction, both CASKIN2-to-partner and partner-to-CASKIN2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CASKIN2 versus TSEN54 in BREAST, with a Pearson correlation of 0.85.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CASKIN2→partner) and Y-score (partner→CASKIN2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BREAST	TSEN54 →	+1.301	+1.331	<.001	<.001	3	17
LARGE_INTESTINE	RPTOR →	+0.966	+0.880	<.001	<.001	3	17
UPPER_AERODIGESTIVE_TRACT	HELZ →	+1.035	+1.129	<.001	<.001	3	16
SOFT_TISSUE	SUPT6H →	+1.160	+1.239	<.001	<.001	3	16
UPPER_AERODIGESTIVE_TRACT	GGA3 →	+1.031	+0.799	<.001	<.001	3	16
BONE	KMT2D →	+1.641	+0.964	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,537 associations by consensus.

CASKIN2 vs TSEN54 — BREAST

Explore this scatter interactively →