CASKIN1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CASKIN1 RNA expression is significantly associated with the protein abundance of many other proteins, with 21,247 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CASKIN1-associated proteins across cancer lineages are CASKIN1_S787, STAU2, and UBE2O. Each is linked with CASKIN1 in more than 5 cancer types. Because this analysis shows association rather than direction, both CASKIN1-to-partner and partner-to-CASKIN1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CASKIN1 versus CASKIN1_S787 in LUAD, with a Pearson correlation of 0.88.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CASKIN1→partner) and Y-score (partner→CASKIN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADCASKIN1_S787 →+2.059+1.050.001<.00136
BRCASTAU2 →+0.377+0.756.002<.00135
LSCCUBE2O →+0.250+0.517<.001<.00135
BRCAHSD17B11 →-0.596-0.667<.001.00235
GBMSQOR →-0.516-0.662<.001<.00135
GBMPLCB2 →-0.497-0.759<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 21,247 associations by consensus.

CASKIN1 vs CASKIN1_S787 — LUAD

Per-sample scatter of CASKIN1 vs CASKIN1_S787 in LUAD (Pearson r = 0.88).

Explore this scatter interactively →

Exploration