CASC15

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CASC15 RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of CASC15’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where CASC15 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types CASC15 is over-expressed in tumor, although a few such as PRAD and KICH show the opposite, repressed pattern.

HNSC, COAD, and LIHC are the cancer types where CASC15 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CASC15 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCAllIV+0.854<.00112view →
COADFemaleAll+0.499<.0019view →
LIHCAllII,III,IV+0.233<.0018view →
READAllIII,IV+0.530.0095view →
LUADMaleAll+1.262<.0014view →
BLCAAllAll+0.848.0074view →
LUSCAllAll+0.450<.0014view →
THCAFemaleAll+0.377<.0014view →
STADMaleII,III,IV+0.266.0014view →
CHOLAllAll+1.613<.0012view →
PRADAllAll−0.260<.0012view →
KICHFemaleII,III,IV−0.620.0421view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

CASC15–HNSC

Tumor-vs-normal expression box plot for CASC15 RNA in HNSC.

Open the HNSC breakdown →

Exploration