CARNMT1

Across TCGA patient cohorts, CARNMT1 protein abundance is significantly associated with the RNA expression of many other genes, with 8,462 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CARNMT1-associated genes across cancer lineages are CCDC92, IPPK, and HDHD3. Each is linked with CARNMT1 in more than 4 cancer types. Because this analysis shows association rather than direction, both CARNMT1-to-partner and partner-to-CARNMT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CARNMT1 versus CCDC92 in BRCA, with a Pearson correlation of -0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CARNMT1→partner) and Y-score (partner→CARNMT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	CCDC92 →	-0.601	-0.425	<.001	<.001	3	5
HNSC	IPPK →	+0.993	+0.435	<.001	<.001	3	5
LSCC	HDHD3 →	+0.584	+0.338	<.001	<.001	3	4
COAD	GALNT15 →	-0.990	-0.315	<.001	.007	3	4
COAD	FGF7 →	-1.055	-0.327	.001	.006	3	4
COAD	SGCD →	-0.815	-0.405	.003	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,462 associations by consensus.

CARNMT1 vs CCDC92 — BRCA

Explore this scatter interactively →