CARD6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CARD6 mutation is significantly associated with the RNA expression of many other genes, with 3,446 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CARD6-associated genes across cancer lineages are TSPAN7, CHAF1A, and RAD51. Each is linked with CARD6 in more than 3 cancer types. Because this analysis shows association rather than direction, both CARD6-to-partner and partner-to-CARD6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TSPAN7 grouped by CARD6-low versus CARD6-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CARD6→partner) and Y-score (partner→CARD6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTSPAN7 →-1.148-3.321<.001<.00134
UCECCHAF1A →+0.647+2.384<.001<.00134
UCECRAD51 →+0.686+1.928<.001<.00134
LUADMARS1 →+0.622+3.214.001.00933
LUADDSG1-AS1 →+0.477+3.250.005.00133
UCECUHRF1 →+0.894+1.928<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,446 associations by consensus.

TSPAN7 by CARD6 expression — UCEC

Box plot of TSPAN7 in CARD6-low vs CARD6-high samples in UCEC.

Explore this box plot interactively →

Exploration